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An S 352
Exam 1 Material
59
Agriculture
Undergraduate 3
05/01/2015

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Term
Jay L. Lush
Definition
First person to combine quantitative statistics with genetic information
Term
Nucleus/Elite Breeders
Definition
Produce pure animals, data collection and analysis, animal rankings and selection (GGP or GP to farm animals)
Term
Multipliers
Definition
Focus on crossbreeding, some selection, mainly expansion (GP or P to farm animals)
Term
End Users/Commercial
Definition
typically crossbred animals, focus on flexibility, producing commodities for various markets
Term
Locus
Definition
specific location of a gene, DNA sequence or position in the genome
Term
Loci
Definition
more than one location in the genome
Term
Allele
Definition
one of a number of alternate forms of a gene or locus (each gene has 2)
Term
Diploid
Definition
having 2 sets of chromosomes
Term
Genotype
Definition
the genetic makeup of an individual with reference to a specific characteristic
Term
Homozygous
Definition
when an individual has 2 identical alleles at a particular locus or at multiple loci
Term
Heterozygous
Definition
when an individual has 2 different alleles of a particular locus or at multiple loci
Term
Trait
Definition
observable or measurable characteristic (Ex: hair color)
Term
Phenotype
Definition
observed category or measured level of performance for a trait (Ex: blonde)
Term
Qualitative
Definition
trait in which the phenotype is expressed in categories (Ex: pea color - yellow or green)
Term
Quantitative
Definition
trait in which the phenotypes show numerical expression (continuous) (Ex: weight - 0-400lbs)
Term
Simply Inherited Trait
Definition
trait affected by one or only a few genes (usu. for qualitative traits)
Term
Polygenic Trait
Definition
trait affected by many genes, some of which are unknown (usu. for quantitative traits)
Term
Breeding Objectives
Definition
a general goal for any breeding program
-list of traits, threshold for traits, time frame for reaching threshold
Term
Breeding Value
Definition
the value of an individual as a parent
- calculated value which includes individual's own data, pedigree, and possibly DNA info
Term
Mating System
Definition
set of rules for choosing which males are mated to which females
Term
Parent Generation
Definition
P1 and P2
Term
Filial Generation 1 (children)
Definition
F1
Term
Filial Generation 2 (children)
Definition
F2
Term
Dominance
Definition
the interaction between alleles of a single locus such that one allele has more of an affect than the other
Term
Gene Action
Definition
allele interaction
Term
Mendelian Sampling
Definition
random sampling of parental genes AND random sampling of gametes in the formation of the embryo
- Basically, you can't control which alleles are passed on
Term
Additive Gene Actions
Definition
expression of the heterozygote is exactly halfway between the expression of the homozygotes
Term
Complete Dominance
Definition
expression of the heterozygote is identical to the expression of the dominant homozygote
Term
Partial or Incomplete Dominance
Definition
expression of the heterozygote is not exactly intermediate to the two homozygotes
Term
Over-Dominance
Definition
expression of the heterozygote is outside the range of the two homozygotes
Term
Epistasis
Definition
interaction among genes at different loci
Term
Sex Linked Inheritance
Definition
pattern of inheritance for genes located on the sex chromosomes (Ex: color blindness)
Term
Sex-Limited inheritance
Definition
phenotypic expression is limited to one sex (Ex: milk production)
Term
Sex-Influenced Inheritance
Definition
gene expression differs in males and females
Term
Mendelian Genetics
Definition
deals with genotypes of individuals or a single cross between two individuals
Term
Allele Frequency
Definition
frequency of a given allele within a population
Term
Genotypic Frequency
Definition
frequency of a single locus genotype within a population
Term
Hardy Weinberg Equilibrium
Definition
a state of constant gene and genotypic frequencies in a large, randomly mated population in the absence of selection, mutation, and migration
Term
Population Genetics
Definition
the study of factors affecting gene and genotypic frequencies
Term
Selection (Non-Random Mating)
Definition
choosing which parents should be parents of the next generation
Term
Mutation
Definition
process of altering DNA to create new alleles
Term
Migration
Definition
when large numbers of individuals move in or out of a population
- potential for loss of certain alleles, or introduction of new ones
Term
Random Drift
Definition
change in frequencies in small populations due to chance
Term
Inbreeding
Definition
the mating of relatives
- parents share a common ancestor
Term
Outbreeding
Definition
the mating of unrelated individuals
Term
Heterosis/Hybrid Vigor
Definition
increased performance of crossbreds over their pure parents
Term
Prepotency
Definition
ability of an individual to produce progeny wiht performance like it's own (uniformity)
Term
1. Increases the likelihood of homozygotes within a population
2. Expression of deleterious recessive alleles (genetic defects)
Definition
Consequences of Inbreeding
Term
Inbreeding Depression
Definition
a decrease in the performance of inbreds, typically in traits like fertility and survivability
- overall increase in homozygosity and decrease in genetic variance
Term
1. Fixing favorable alleles
2. Uniformity
3. Create opportunity for hybrid vigor/heterosis
Definition
Reasons to Inbreed
Term
1. Increase heterozygosity
2. Increase genetic variance
3. Decreased uniformity
Definition
Reasons to Outbreed
Term
P = mean + G + E
P = mean + BV + GCV + Et + Ep
Definition
Genetic Model
Term
Breeding Value (BV)
Definition
part of the genotypic value that is due to independent, additive gene effects
- CAN be passed onto offspring
Term
Gene Combination Value (GCV)
Definition
part of the genotypic value that is due to the specific combination of genes present in an individual
-CANNOT be passed onto offspring
Term
Progeny Difference (PD)/Transmitting Ability (TA)
Definition
1/2 BV
Term
Permanent Environmental Effect
Definition
an environmental effect that permanently influenced an individual's performance for a repeated trait
Term
Temporary Environmental Effect
Definition
an environmental effect that influences a single performance record of an individual
Term
Repeated Traits
Definition
traits for which individuals commonly have more than one performance record
Ex: milk production, race records, litter size
Term
Producing Ability (PA)
Definition
performance potential of an individual for a repeated traits
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