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BMB 1 Week 3
BMB 1 Week 3
18
Biology
Undergraduate 3
04/28/2014

Additional Biology Flashcards

 


 

Cards

Term

 

 

 

 

GIRK

Definition
  • shortcut pathway
  • SA node Cell
  • ACh activates a GPCR and the betagame subunit goes off to activate a k channel, allowing K to leave the cell
  • this hyperpolarizes the cell to slow down heart beat
  • alpha subunit creates cascade that closes IF and calcium channels
Term

 

 

 

PKA

Definition
  • 2 catalytic domains and 2 regulatory domains 
  • need 4 cAMP to bind with the two regulatory domains to change the conformation to active
  • PKA phosphorylates proteins with ATP (Ca chanels)
  • protein phosphatase dephosphorylates things
Term

 

 

 

PLC

Definition
  • Gq
  • PLC, DAG, PKC, ER, and IP3
  • glutamate Group 1 mGluR use this 
  • increase protein phosphorylation and activate calcium-binding proteins
  • IP3 releases calcium from ER
  • phosphatases convert IP3 to inositol
  • Group 2 and group 3 use Gi
Term

 

 

 

Dopamine D1 and D2

Definition
  • D2 uses Gi GPCR
  • D1 uses Gs GPCR
Term

 

 

 

Signal Amplification

Definition
  • receptor to Gprotein
  • not gprotein to AC
  • AC to cAMP
  • not cAMP to PKA
  • PKA to phosphorylation
Term

 

 

 

Excitotoxicity

Definition
  • overload of Ca through NMDARs
  • too much glutamate release (from damaged neurons) causes excessive calcium influx
  • causes cell death(excitotoxicity) through apoptosis from Ca activating caspases
Term

 

 

 

Biological Toxins

Definition
  • botulinum toxin: bacteria, blocks ACh release
  • Tetrodotoxin(TTX): pufferfish/fugu, blocks sodium channels (action potentials and thus transmission)
  • botulinum toxins destroy SNARE protein(syntaxin, SNAP-25, synaptobrevin
  • tetanus toxin destroys synaptobrevin
Term

 

 

 

Myasthenia Gravis

Definition
  • synapse abnormality
  • normal presynaptic terminal
  • post synaptic terminal has reduced nAChR on muscle cells
  • synaptic cleft is wider and junctional folds are shallower
  • all lead to less response, reduced transmission
  • autoimmune disease against nicotinic receptors
  • ptosis, eyelids effected
  • AChE inhibitors(edrophonium, neostigmine) can relieve ptsosis
Term

 

 

 

Spike Initiation Zone (SIZ)

Definition
  • initial segment of axon hillock
  • where action potential is initiated or not
  • highest voltage gated Na channel density and lowest AP threshold(most negative)
Term

 

 

 

Spatial vs temporal Summation

of EPSPs 

Definition
  • temporal: one input(A) activated in successation(same input different time) and the inputs will summate (time)
  • spacial summation: more then one input at different locations at the same time or different times (length)
  • responses summate in axons with long time constants (and length)
  • short time/length do not have enough time to summate
Term

 

 

 

Passive Properties of Neurons

Definition
  • resting membrane resistance(larger cell, smaller R)
  • larger cells have more ion channels open at rest(smaller resistance)
  • membrane capacitane(larger cell, larger C)
  • axial resistance of processes(larger process, smaller Ra)
  • same current will produce a greater EPSP(V) in a smaller cell
Term

 

 

 

Minature spontaneous synaptic response

(mini)

Definition
  • most of time release of content from single vesicle
  • response very small
  • quantal analysis is compareing responses to miniature to determine number of vessicles released
Term

 

 

 

Types of Synaptic plasticity

Definition
  • short term: activity dependent strengthening or weakening of chemical synapses which lasts for up to a few minutes
  • long term: activity-dependent strengthening or weakening of chemical synapses which lasts from hours to years
Term

 

 

 

Short term synaptic plasticity

Definition
  • seconds to minutes
  • synaptic facilitation: if another action potential comes when some Ca still left in terminal, then more Ca comes in and more neurotransmitter is released (difference in amplitude)
  • synaptic depression: reduction of NT if two + AP invade the terminal and the pool of vessicles depletes
  • synaptic potentiation and augmentation: 
Term

 

 

 

Long term synaptic plasticity

Definition
  • hours to years
  • long term potentiation (LTP): 
  • Long term depression (LTD): 
  • LTP and LTD can occur only on the dendritic spines
  • LTP or LTD occur independently on individual synapses of a neuron
Term

 

 

 

Long Term Potentiation

(LTP)

Definition
  • LTP is triggered by high stimulation rate(more than 10 stim/s)
  • during high frequency stim, strong depolarization causes silent NMDA receptors to be permeable for Ca via removing Mg block from the receptor, leading to LTP (hippocampus, uses AMPA)
  • this increases effectiveness of existing postsynaptic AMPA receptors via phosphorylation(early or fast phase of LTP)
  • late phase LTP is the expression and insertion of additional AMPA receptor
  • increasing of the presynaptic NT release via retrograde signaling
Term

 

 

 

Induction of LTD

(hippocampus)

Definition
  • LTD is triggered by low stimulation rate (about 1 stim/s) (low levels of intracell Ca)
  • under weak depolarization, NMDA receptor channel is blocked by Mg preventing Ca influx
  • low concentration Ca activates protein phosphatases(during LTP, the kinases are activated)
  • protein phosphatases dephosphorylate AMPA receptors restricting their efficiency(postsynaptic responses become smaller)
Term

 

 

 

Long Term Depression (LTD)

Cerebellum

Definition
  • climbing fibers activate Voltage gated Ca channels
  • parallel fibers activate AMPA receptors9depol due to an influx of Na
  • parallel fibers activate metabotropic receptors(2nd messenger-activating prtotein kinase C)
  • LTD occurs when all three intracellular signals occur at the same time ^^^^^
  • purkinje cells are inhib, therefore when their activity is suppresed by LTD, these neurons provide less inhib to their target cells, making the targets more excited
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