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ENZYMES
Enzyme structure and function Eduqas A-level biology
39
Biology
12th Grade
11/16/2024

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Term
What is metabolism?
Definition
Biochemical reaction
Term
What are enzymes?
Definition
Globular proteins with a specific tertiary structure held by hydrogen bonds, ionic bonds, disulphide bridges. They act as biological catalysts that speed up the rate of metabolic reactions by lowering the activation energy.
Term
What is activation energy?
Definition
Energy required for a reaction to begin.
Term
What are intracellular enzymes?
Definition
They work inside our cells
-in solution
-membrane bound
e.g. lysosomes, DNA replication
Term
What are extracellular enzymes?
Definition
They work outside our cells
-secreted
e.g. Amylase, protease
Term
What are the two ways in which enzymes can catalyse metabolic reactions?
Definition
Anabolic and Catabolic
Term
What does anabolic mean?
Definition
Forms a product e.g. Photosynthesis
Term
What does catabolic mean?
Definition
Breaks a bond e.g. Respiration
Term
What does active site mean?
Definition
Has a specific shape, only complementary to the substrate which binds to form an ESC, one enzyme that binds to specific amino acids will not be able to bind to others.
Term
What is the lock and key model?
Definition
-The substrate fits into the active site, they are complementary shapes this forms an ESC
-The product is then formed and as it doesn't fit into the active site, the products are released.
-Enzymes are very specific
Term
What is the induced fit model?
Definition
-Substrate and active of the enzyme are not complementary
-When substrate binds, the active site changes shape and fits itself around the substrate
-Places a strain on the substrate and distorts a particular bond, lowering the activation energy required to break the bond
-The products are formed and leave the active site which then returns to its original shape.
Term
What does the enzyme lysozyme do?
Definition
Helps kill bacteria by catalysing the hydrolysis of sugars in the peptidoglycan cell walls.
Cell wall is weakened and when the bacteria absorbs water by osmosis the walls burst
Term
Where can lysozymes be found?
Definition
Tears, saliva, human milk, and inside the lysosomes
Term
What are enzymes properties?
Definition
-Specific-Complementary shape of the active site. This depends on the sequence of amino acids that make up the active site
-Fast acting- very high turnover number, can convert many molecules of substrate per unit time
-Soluble- with hydrophilic R grp found on the outside of the molecules
Term
What factors affect the rate of enzymes?
Definition
-Temperatures
-pH
-Substrate Conc.
-Enzyme Conc.
-Inhibitors
Term
How does pH effect the rate of enzyme activity?
Definition
Optimum pH-rate of reaction is at its maximum
-Enzymes only work within a narrow range of pH values
-Small deviations cause reversible changes in enzyme structure resulting in inactivation
-Extremes of pH can permanently denature an enzyme
Term
Where is pepsin found?
Definition
Stomach
Term
Where is amylase found?
Definition
Saliva
Term
What can cause an extreme change in pH?
Definition
May alter the electrostatic charge on the side chains of the amino acids.
If both the active site and substrate have the same charge they will repel.
Term
What can buffers be used for?
Definition
Added to enzyme-controlled reactions to maintain a constant pH.
Term
What happens to the rate of reaction as substrate conc. increases?
Definition
Increase
Term
What happens to the substrate when conc. of it is low?
Definition
Substrate conc. is the limiting factor
Term
When does enzyme conc. becomes the limiting factor?
Definition
As more substrate is added, there are more successful collisions and more enzymes sites become occupied, until eventually the rate of reaction reaches a maximum substrate of molecules are in excess.
Term
What is an inhibitor?
Definition
It prevents the enzymes to form ESC.
Term
What is a competitive inhibitor?
Definition
It is like blocking, they are similar in shape to a substrate, complementary to the active site and bind to it, blocking the actual substrate from entering, so fewer esc can form.
If substrate conc. increases the inhibitor's effect is reduced
Term
What is an example of competitive inhibitor?
Definition
Malonic acid
Term
How does malonic acid work?
Definition
A reaction is involved in aerobic respiration is catalysed by the enzyme succinic dehydrogenase. The competitive inhibitor malonic acid has a similar shape to the substrate succinic acid.
Term
What is a non-competitive inhibitor?
Definition
Changes the shape of the active site
It is not similar shape to the substrate. It binds to the enzyme at a point other than the active site known as the allosteric site.
This changes the shape of the enzyme and therefore the active site so it is not complementary to the substrate. The enzyme molecule may be permanently altered.
Term
What is an example of non-competitive inhibitor?
Definition
Cyanide
Term
Which inhibitor has the lowest rate of reaction?
Definition
No inhibitor-highest
Competitive - the effect of it can be reduced
Non-competitive - lowest
Term
What are immobilised enzymes?
Definition
Fixed, trapped or bound on an inert matrix
Term
Examples of how enzymes are immobilised. (4)
Definition
-Adsorption onto a matrix
-Covalent binding to a support
-Trapping within a fibrous matrix
-Encapsulation behind a selectively permeable membrane
Term
Why enzymes on a surface have a higher rate of reaction than those immobilised in beads?
Definition
In beads- have a lower r.r. because some active sites are inside and substrate will take time to diffuse into them
-On surface the active sites are more available- high r.r.
Term
Advantages of immobilised enzymes ? (6)
Definition
-Enzymes are easily recovered for re-use
-Product is not contaminated with the enzyme
-Enzymes with different pH can be used together
-Increased stability over a range of temp.
-Enzymes can easily added or removed giving greater control over the r.r.
-Increased stability over a range of pH values
Term
Fill in the gaps
denature
wider
stabilises
Definition
Trapping an enzyme __________ it and prevents the shape change that would ________ its active site, so it can be used under _____ range of conditions.
Term
How can immobilized enzymes be used for lactose-free milk?
Definition
It can be produced using lactase trapped in alginate beads in a column, which hydrolyses the lactose to its monosaccharides
Term
How are biosensors used?
Definition
Covert chemical signals into electrical.
Detect and measure low conc. of substrate in a mixture.
Term
How are biosensors used for measurements of glucose conc.?
Definition
Glucose oxidase is immobilised on a selectively permeable membrane.
When in sample, it binds to glucose and small electric current is produced. Current is detected by an electrode and conc. of glucose can be read on the screen
Term
What is HFCS?
Definition
A sweetener manufactured in a multi-step process from starch. It involves several immobilised enzymes which require different conditions.
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