Shared Flashcard Set

Details

EXAM # 2
BIO 110
84
Biology
Undergraduate 2
02/23/2013

Additional Biology Flashcards

 


 

Cards

Term
The light reflected most by chlorophyll is:
Definition
green
Term
Allosteric inhibition is generally a result of:
Definition
binding regulatory molecules at a site other than the active site
Term
The oxygen released in photosynthesis comes from:
Definition
water
Term
The removal of electrons from a compound is known as:
Definition
oxidation
Term
Light excites __________ in photosynthetic pigments.
Definition
electrons
Term
The light-independent reactions of photosynthesis:
Definition
fix carbon dioxide into a stable organic molecule
Term
During the electron transfer chain, which ions accumulate in the outer compartment of the mitochondria?
Definition
hydrogen
Term
Which type of plants are adapted to hot, dry conditions?
Definition
C4 & CAM
Term
The Krebs cycle takes place in the:
Definition
mitochondria
Term
ATP
Definition
-can be produced by photosynthesis

-is produced in the breakdown of organic molecules

-is generated in glycolysis

-all of these
Term
What is the 1st law of thermodynamics?
Definition
Energy- is neither created nor destroyed, but can be transferred
from one form to another
Term
What is the 2nd law of thermodynamics?
Definition
• Entropy- (a measure of dispersal of energy in a system) increases
spontaneously
• The entropy of two atoms decreases when a bond forms between
them (endergonic reaction)
Term
The total amount of energy available in the universe to do
work is always ___________.
Definition
decreasing
Term
The amount of energy in a molecule that is available to do work
Definition
free energy
Term
A chemical change that occurs when atoms, ions, or molecules
interact
Definition
Reaction
Term
Atoms, ions, or molecules that enter a reaction
Definition
Reactant
Term
Atoms, ions, or molecules remaining at the end of a reaction
Definition
Product
Term
Reactions that require a net input of energy (energy in)
Definition
Endergonic
Term
Reactions that end with a net release of energy (energy out)
Definition
Exergonic
Term
The minimum amount of energy needed to get a reaction started
Definition
Activation energy
Term
A nucleotide with three phosphate groups that transfers a phosphate group and energy to other molecules
Definition
ATP (adenosine triphosphate)
Term
• A phosphate-group transfer
• ADP binds phosphate in an endergonic reaction to replenish ATP
(ATP/ADP cycle)
Definition
Phosphorylation
Term
• A catalyst that makes a specific reaction occur much faster than it
would on its own
• Most are proteins, some are RNA
Definition
Enzymes
Term
The specific reactant acted upon by an enzyme
Definition
Substrate
Term
Binding at enzyme active sites may bring on the transition
state by four mechanisms, which are?
Definition
• Helping substrates get together
• Orienting substrates in positions that favor reaction
• Inducing a fit between enzyme and substrate (induced-fit model)
• Shutting out water molecules
Term
• Atoms or molecules (other than proteins) that are necessary for
enzyme function
• Example: Iron atoms in catalase
Definition
Cofactors
Term
• Organic cofactors such as vitamins
• May become modified during a reaction
Definition
Coenzymes
Term
An antioxidant that neutralizes free radicals (atoms
or molecules with unpaired electrons that attack biological
molecules)
Definition
Catalase
Term
any series of enzyme-mediated reactions by
which a cell builds, rearranges, or breaks down an organic substance
Definition
metabolic pathway

• Anabolic pathways build molecules
• Catabolic pathways break apart molecules
• Cyclic pathways regenerate a molecule from the first step
Term
Regulatory molecules can bind to an allosteric site to activate
or inhibit enzymes
Definition
Feedback inhibition
Term
• A molecule that gives up electrons is oxidized
• A molecule that accepts electrons is reduced
• Coenzymes can accept molecules in redox reactions (also called electron
transfers)
Definition
Oxidation-reduction reactions
Term
A series of redox reactions in membrane-bound enzymes or
molecules that release energy in small, controlled steps
Definition
Electron transfer chain
Term
Light emitted from metabolic reactions in living organisms
Definition
Bioluminescence
Term
The synthesis of organic molecules from inorganic molecules
using the energy of light
Definition
Photosynthesis
Term
The distance between the crests of two successive waves of light
(nm)
Definition
Wavelength
Term
An organic molecule that selectively absorbs light of specific
wavelengths
Definition
pigment
Term
• The most common photosynthetic pigment
• Absorbs violet and red light (appears green)
Definition
Chlorophyll a
Term
An organelle that specializes in photosynthesis in plants and
many protists
Definition
Chloroplast
Term
• A semifluid matrix surrounded by the two outer membranes of
the chloroplast
• Sugars are built here
Definition
Stroma
Term
• Folded membrane that make up thylakoids
• Contains clusters of light-harvesting pigments that absorb
photons of different energies
Definition
Thylakoid membrane
Term
• Groups of molecules that work as a unit to begin the reactions of
photosynthesis
• Convert light energy into chemical energy
Definition
Photosystems (type I and type II)
Term
• Light energy is transferred to ATP and NADPH
• Water molecules are split, releasing O2
Definition
Light-dependent reactions
Term
Energy in ATP and NADPH drives synthesis of glucose and other
carbohydrates from CO2 and water
Definition
Light-independent reactions
Term
Process by which light energy breaks down a molecule such as water
Definition
Photolysis
Term
Organized arrays of enzymes, coenzymes, and other proteins that
accept and donate electrons in a series
Definition
Electron transfer chains
Term
ATP forms in the ______.
Definition
stroma
Term
A light-driven reaction that attaches a phosphate group to a
molecule
Definition
Photophosphorylation
Term
Electrons cycle within photosystem I
Definition
Cyclic photophosphorylation
Term
Electrons move from water to photosystem II, to photosystem I,
to NADPH
Definition
• Noncyclic photophosphorylation
Term
Enzyme-mediated reactions that build sugars in the stroma of
chloroplasts
Definition
Calvin-Benson cycle
Term
• Extraction of carbon atoms from inorganic sources (atmosphere)
and incorporating them into an organic molecule
• Builds glucose from CO2
• Uses bond energy of molecules formed in light-dependent
reactions (ATP, NADPH)
Definition
Carbon fixation
Term
Enzyme ______ attaches CO2
to RuBP and forms two 3-carbon PGA molecules
Definition
rubisco
Term
• Small openings through the waxy cuticle covering epidermal
surfaces of leaves and green stems
• Allow CO2
in and O2 out
• Close on dry days to minimize water loss
Definition
Stomata
Term
• Plants that use only the Calvin–Benson cycle to fix carbon
• Forms 3-carbon PGA in mesophyll cells
• Used by most plants, but inefficient in dry weather when stomata
are closed
Definition
C3 plants
Term
• At high O2
levels, rubisco attaches to oxygen instead of carbon
• CO2
is produced rather than fixed
Definition
Photorespiration
Term
• Plants that have an additional set of reactions for sugar
production on dry days when stomata are closed; compensates
for inefficiency of rubisco
• Forms 4-carbon oxaloacetate in mesophyll cells, then bundlesheath cells make sugar
• Examples: Corn, switchgrass, bamboo
Definition
C4 plants
Term
• Plants with an alternative carbon-fixing pathway that allows them
to conserve water in climates where days are hot
• Forms 4-carbon oxaloacetate at night, which is later broken down
to CO2
for sugar production
• Example:succulents, cactuses
Definition
CAM plants(Crassulacean Acid Metabolism)
Term
Organisms that make their own food using energy from the
environment and inorganic carbon
Definition
Autotrophs
Term
Organisms that get energy and carbon from organic molecules
assembled by other organisms
Definition
Heterotrophs
Term
• Extract energy and carbon from simple molecules in the
environment (hydrogen sulfide, methane)
• Used before the atmosphere contained oxygen
Definition
Chemoautotrophs
Term
• Use photosynthesis to make food from CO2 and water, releasing
O2
• Allowed oxygen to accumulate in the atmosphere
Definition
Photoautotrophs
Term
Selection pressure on evolution of life
Definition
Oxygen radicals
Term
Development of ATP-forming reactions
Definition
Aerobic respiration
Term
Formation of ozone (O3
) layer
Definition
Protection from UV radiation
Term
Aerobic metabolic pathways (using oxygen) are used by most
eukaryotic cells
Definition
Aerobic respiration
Term
Anaerobic metabolic pathways (occur in the absence of oxygen)
are used by prokaryotes and protists in anaerobic habitats
Definition
Fermentation
Term
Aerobic respiration and fermentation both begin with
________, which converts one molecule of glucose into two
molecules of ________.
Definition
glycolysis; pyruvate
Term
Fermentation is completed in the ________, yielding __ ATP per
glucose molecule
Definition
cytoplasm; 2
Term
Aerobic respiration is completed in ________, yielding __ ATP
per glucose molecule
Definition
mitochondria; 36
Term
What are the 3 stages of aerobic respiration?
Definition
• Glycolysis
• Acetyl-CoA formation and Krebs cycle
• Electron transfer phosphorylation (ATP formation)
Term
C6H12O6
(glucose) + O2
(oxygen) →
CO2
(carbon dioxide) + H2O (water)
Definition
Term
Coenzymes NADH and FADH2
carry ________ and ________.
Definition
electrons; hydrogen
Term
Glycolysis starts and ends in the ________ of all prokaryotic
and eukaryotic cells
Definition
cytoplasm
Term
Four ATP are formed by _________________ (net
2 ATP)
Definition
substrate-level phosphorylation
Term
• A sequence of enzyme-mediated reactions that break down 1
acetyl CoA into 2 CO2
• Oxaloacetate is used and regenerated
• 3 NADH and 1 FADH2 are formed
• 1 ATP is formed
Definition
Krebs cycle
Term
• Occurs in mitochondria
• Results in attachment of phosphate to ADP to form ATP
Definition
Electron transfer phosphorylation
Term
• Pyruvate is split into acetaldehyde and CO2
• Acetaldehyde receives electrons and hydrogen from NADH,
forming NAD+ and ethanol
Definition
Alcoholic fermentation
Term
Pyruvate receives electrons and hydrogen from NADH, forming
NAD+ and lactate
Definition
Lactate fermentation
Term
(“red” muscles) make ATP by
aerobic respiration
• Have many mitochondria
• Dominate in prolonged activity
Definition
Slow-twitch muscle fibers
Term
(“white” muscles) make ATP by
lactate fermentation
• Have few mitochondria and no myoglobin
• Sustain short bursts of activity
Definition
Fast-twitch muscle fibers
Term
When blood glucose concentration _____, the pancreas
increases _______ secretion
Definition
rises; insulin
Term
When blood glucose concentration _____, the pancreas
increases _______ secretion
Definition
falls; glucagon
Term
_______ products enter glycolysis.
Definition
Glycerol
Term
________ products enter the Krebs cycle.
Definition
Fatty acid
Supporting users have an ad free experience!