Shared Flashcard Set

Details

Exam 2
N/A
121
Biology
Undergraduate 2
02/15/2015

Additional Biology Flashcards

 


 

Cards

Term
What are the three types of ion channel structures?
Definition
  1. Hetero: different subunits
  2. Homo: same subunits
  3. Pseudo: all one piece joined together
Term
What is a type of non-selective channel?
Definition
Leak channels
Term
What are the three types of channels? (In terms of how they are activated)
Definition
  1. Voltage Gated: when an action potential changes the charge of the membrane and it opens
  2. Stretch: touch receptors on the skin help activate it (i.e., when you touch your skin and it stretches and the stretch opens the channel)
  3. Ligand: when a NT binds to the channel (inside or outside) and causes it to open (e.g., capsaicin can go through the bilayer and binds on the inside.
Term
What are the three types of open/close for channels?
Definition
  1. Conformational/Regional: when one part of the gate changes shape to open
  2. Conformational/General: when the entire gate changes shape to open
  3. Blocking particle: when a particle tethered to the channel blocks and unblocks
Term
What are the two ways a NT can activate a channel?
Definition
  1. Direct/Ionotropic: a NT binds directly to the channel and opens it
  2. Indirect/Metabotropic: when a NT binds to a receptor which activates a g-protein coupled receptor which goes to open a channel
Term
What are the four ways tastes activate receptors?
Definition
  1. Salt: sodium goes straight through an open channel
  2. Acid: H+ molecule goes and either blocks potassium channels are starts flowing through them, either way block the flow of K+ out
  3. Bitter: quinine blocks K channels
  4. Sweet/Umami/Bitter: uses g-proteins to activate channels
Term
How do olfactor receptors work?
Definition
Through 2nd messengers which will continue to depolarize the cell (PLC, IP3 and cAMP pathways)
Term
What is the most common cholinergic receptor? How big is it? What subunits does it have? Which one is the binding site?
Definition

Nicotinic

 

8 nm at widest point, hole is only 0.7 nm.

 

It has beta, gamma, and delta. Alpha is the binding site.

Term
What are 3 other agonists for acetylcholine?
Definition
Caffine, nicotine, and muscarine.
Term
How many domains are in VG Na channels? How many subunits are in each domain? Which are significant?
Definition
  • 4 Domains
  • Big loop between subunits 5 and 6 is what gives the channel selectivity
  • Subunit 4 is the voltage sensor: it is positively charged so when the membrane changes charge it causes a conformational change
Term
How do sodium gates close?
Definition
The blocking particle closes after about 1 millisecond. Then it leaves as the h gate closes.
Term
What is TTX?
Definition
Tetratodoxin. It blocks the VG Na channels. From about 20 minutes to about 4 hours afterwards, they go from numbness, to headache, to nausea, to paralysis, respiratory issues, convulsions, and then death.
Term
What is red tide?
Definition
Brevotoxin, or shellfish toxin. Activates Na channels way longer than they should be activated.
Term
How does scorpion toxin work?
Definition
It keeps Na channels open at rest longer and causes all nerve and muscle cells to be depolarized. It keeps then from being inactivated after activation.
Term
What does batrachotoxin do?
Definition
Same as scorpion, lilies, and buttercups. It causes Na channels to open earlier and stay open longer.
Term
What does conotoxin do?
Definition

It blocks VG Na channels, acetylcholine receptors, and VG Ca channels.

 

Causes a very quick death.

Term
What is ciguatoxin?
Definition
It opens up sodium channels and depolarizes cells. It is produced by algae which is eaten by fish and then by humans.
Term
What is saxitoxin?
Definition
From shellfish. It blocks sodium channels.
Term
What is the structure of a potassium channel? How does it work? How is it selective?
Definition

It's a homotetramer. It has one n gate that opens up shortly have depolarization.

 

The Na ion cannot pass through because the O groups cannot form proper bonds with the Na ion.

Term
What is black mamba toxin? How does it work?
Definition
Dendrotoxin. It is basically a plug that completely blocks potassium channels.
Term
How do sodium channels close?
Definition
A blocking particle (gate) swings in and closes the channel.
Term
What are inactivating potassium channels?
Definition
They inactivate so rapidly you do not seen an on response, only an off response.
Term
What are inward rectifying potassium channels?
Definition
They channels are activated at depolarization and allow potassium to rapidly flow in, helping restore resting potential.
Term
How do calcum activated potassium channels work? What else can do this?
Definition

Voltage gated Ca channels open during depolarization and the Ca goes and binds to these K channels intracellularly, allowing K to flow out.

 

ACh can bind to Ca channels, letting Ca in which can go bind to K channels to open them.

Term
How is a Ca channel structured? What does there activation look like?
Definition

There are 4 alpha subunits, that's all we need to know.

 

Some activate quickly and inactivate quickly, but some also inactivate very slowly.

Term
What are the 5 types of ion channels?
Definition
  1. Voltage gated
  2. Inward rectifiers: help restore membrane potential
  3. Purinergic: for cAMP and gAMP
  4. Glutamate
  5. Cyclic Nucleotide-Gated Channels
Term
What is hyper vs hypo kalemic?
Definition
  • Hyper: too much potassium in blood which is treated by a high carb, low K diet
  • Hypo: too little potassium in blood which is treated by a low carb, high K diet
Term
What is myasthemia?
Definition
Muscle weakness caused by mutation to the ACh receptor
Term
What is malignant hyperthermia?
Definition
Your body overheats and there is severe damage to muscle cells and there is heart malfunction, swelling of brain, and death.
Term
What is the PLC stream?
Definition
PLC is activated by g-proteins, which splits PIPinto DAG and IP3. DAG stimulates PKC. IP3 can cause Ca release.
Term
What are TRP channels? How are they structured?
Definition
Transient receptor protein channels. They have 6 subunits. Between 5 and 6 is where it is permeable to Ca and Na.
Term
What are 6 functions of TRP channels?
Definition
  1. Yeast: hypertonicity
  2. Nematodes: noxious chemicals
  3. Male Mice: pheromones
  4. Humans: sweet, bitter, umami, temperature, pain
  5. Mechanosensation
  6. Hearing
Term
What are the 3 modes of TRP activation?
Definition
  1. Metabotropic activation of PIP2 pathway from other receptors (i.e., other receptor gets activated and a g-protein comes over and activates channel)
  2. Ligand Activation: a ligand binds directly to the TRP channel (e.g., capsaicin, icilin)
  3. Direct Activation: changes in temperature and mechanical activation
Term
What is the TRPV/Vanilloid Receptor family?
Definition
Consists of vanilloid receptor 1 (VR1/TRPV1) and vanilloid like receptor 1 (VRL-1/TRPV2).
Term
What is the TRPV1 or VR-1 receptor?
Definition

Activated by heat greater than 43 degrees/spiciness. Heat or H+ can activate from the outside. Capsaicin goes through the bilayer and attaches to the inside.

 

Ca and Na are let through.

Term
What are the relative burns of some peppers? 5 of them.
Definition
  1. Bell Pepper: 0 Scovill units
  2. Jalapeno: 2,000 - 5,000
  3. Serrano: 5,000 - 15,000
  4. Thai: 50,000 - 100,000
  5. Habanero: 100,000 - 300,000
Term
What channel may be involved in salty taste?
Definition
tTRPV1
Term
What does TRPV2 sense?
Definition
Temperatures about 52 degrees
Term
What does TRPV3 sense?
Definition
Temperature greater than 31 degrees
Term
What does TRPV4 sense?
Definition
Temperature about 25 degrees and osmotic pressure
Term
What is the TRPM family?
Definition
Melastatin TRP channels. They include temperature and chemical senses.
Term
Which two should we know? What do they sense?
Definition
  1. TRPM5: tastes bitter, sweet, and umami; this happens through downstream effects --> tastes activate transient receptors which cause 2nd messengers to activate TRPM5
  2. TRPM8: temperatures below 26 degrees, methol, and icilin
Term
What are TRPP channels?
Definition
Polycystic channels
Term
What does TRPA1 sense?
Definition
  • Noxious cold (not common)
  • Horseradish
  • Mustard Oil
  • 9-tetrahydrocannibinol
  • Cinnamaldehyde
  • Ginger
  • Mechanosensation
  • Olfaction
  • Osmosensation

It can interact with TRPV1

Term
What is unique about TRPA1 and zinc?
Definition
TRPA1 has a zinc binding site. So zinc dust can go in while it's closed, bind, and allow Ca,Na in
Term
What does the TRPC2 channel sense?
Definition

Pheromone detection in mice

 

Male mice that lack this receptor do not display correct behavior and will mate with male/females indiscriminately.

 

Lack of pheromone-evoked neuronal acitivity in the vomeronasal organ.

Term
What does TRPC3 sense? TRPC5?
Definition
  1. TRPC3: hey are photosensitve retinal ganglion cells.
  2. TRPC5: in the amygdala; without these, mice exhibit diminished fear levels
Term
What does garlic act on?
Definition
TRPV1 for hot and TRPA1 for pain.
Term
What were the two people who had orginial theories of synapses?
Definition
  • Sir John Eccles: brit that said predominant synapse would be electrical
  • Bernard Katz: Eccles' student, he said no they were mostly chemical
Term
What allowed us to study synapses?
Definition
Electron microscopy. Settled ND and RT debate
Term
What is the gap junction?
Definition

The 2-3nm between two membranes. There are actual structures connecting them.

 

In a chemical synapse, it is more around 16-30, maybe even 40.

Term
What are connexons?
Definition

The are what connect two membranes and forms pores. Each membrane has half and it allows smaller substances to pass through.

 

Each connexon has 6 subunits, which are called connexins.

Term
What is the coupling coefficient? How is it affected?
Definition

If all connexons are open, the coupling coefficient is 1. If half are open, the efficient is 0.5.

 

Depolarizing a cell can open up gap junctions, raising the CC.

Term
What is hysteresis?
Definition

With a normal CC, when the membrane is depolarized it will get higher.

 

In hysteresis, the CC remains constant regardless of the membrane potential.

Term
What is a rectifying synapse? What's an example?
Definition

One that allows current to flow only one direction (same concept as rectifying channels).

 

The nerve in crayfish that allows them to flick their tails so quickly.

Term
Whats the difference in time between electric and chemical synapses?
Definition
Electrical has virtually no delay, while chemical has about 2ms delay.
Term
What are the two categories of CNS synaptic membranes?
Definition
  1. Gray's Type I: asymmetrical and typically excitatory; there is more density in post cell and vesicles are circular
  2. Gray's Type II: symmetrical and typically inhibitory; they have qual density everywhere and vesicles are flatter
Term
What are the three ways to inactivate an NT?
Definition
  1. Enzymatic degradation (e.g., ACh by cholinesterase)
  2. Diffusion
  3. Re-uptake
Term
What are the 5 criteria for a NT?
Definition
  1. Must be synthesized in pre neuron
  2. Must be found in a high enough concentration to be considered meaningful
  3. Have same effect when applied externally
  4. It can be blocked by pharmacological substances
  5. Must be removed in specific way from synapse
Term
What are the 9 steps of vesicles?
Definition
  1. Docking
  2. Priming (needs ATP)
  3. Exoctyosis (needs Ca)
  4. Endocytosis
  5. Translocation
  6. Endosome Fusion
  7. Budding
  8. NT Uptake
  9. Translocation
Term
What are the SNARE proteins on each side?
Definition
  • Vesicle Side: snyaptobrevin and synatotagmin
  • Membrane Side: SNAP-25 and syntaxin
Term
What did Heuser-Reese come up with? What are omega profiles?
Definition

Put tissue in a tube and it would slide down while exocytosis was occuring and freeze i t in the middle of the process. Can then view it with microscopy.

 

The views of vesicle as they are bound and exocytosing.

Term
What are mepps?
Definition

Miniature end plate potentials

 

They are the muscle's equivalent of EPSP.

Term
What is the structure of the ACh receptor?
Definition

Heteropentimer. Only binds to the two alpha subunits.

 

ACh receptors are permeable to Na ions when activated.

Term
What are the 3 types of inhibition?
Definition
  1. Direct
  2. Presynaptic
  3. Shunting
Term
How are antibodies used with NTs?
Definition
Putting antibodies into a cell that attach to NTs. The antibodies are tagged with a visible marker that we can track them with (luminescent)
Term
What are classic ionotropic NTs?
Definition
  • Mainly amines
  • Produced in relatively short biosynthetic pathways. This allows reconversion of inactivated transmitter substances at the actual axon terminal
Term
What are two ACh antagonists?
Definition
Curare and atropine
Term
What is the order of catecholamines in synthesis?
Definition
  • Tyrosin
  • L-DOPA
  • DA
  • NE
  • Epinephrine
Term
What are some other names for norepinephrine and epinephrine?
Definition
Noradrenaline and adnrenaline
Term
What are the biogenic amines?
Definition
  • Serotonin
  • Histamine
Term
What is 5-HT? Where does it come from?
Definition
It's an indolamine made from tryptophan. It's used in antidepressants, LSD increases its release, and it is used to control sleep and wakefulness.
Term
How is glutamate made?
Definition
Glutamine --> glutaminase --> glutamate --> glutamine synthetase --> glutamine --> restart
Term
What are the three types of glutamate receptors?
Definition
AMPA, NMDA, and Kainate. Those are also the name of the agonists that open them.
Term
How is GABA made?
Definition
Glutamic acid --> GABA with glutamic acid decarboxylase
Term
What is GABAa?
Definition

A pentamer receptor

 

It is a ligand gated ion channel that lets Cl- in. It hyperpolarizes the postsynaptic nerve (inhibitory).

Term
What is GABAb?
Definition

It is metabotropoic!!

 

On pre cell, it inhibits Ca channels, preventing vesicular release.

 

On post cell, it activates potassium channels, which hyperpolarizes the cell.

Term
What gases are used for signalling?
Definition
  • NO: promotes cGMP production
  • CO: promotes cGMP production and potassium channels
  • H2S: promotes cAMP and potassium channels
Term
What are the 3 types of 2nd messengers?
Definition
  1. Amino Acids (glutamate)
  2. Amines and Purines (catecholamines and indolamines)
  3. Peptides
Term
What are the ionotropic NTs?
Definition
  • Nicotinic ACh
  • GABA
  • Glycine
  • AMPA
  • NMDA
Term
What are the metabotropic NTs?
Definition
  • G-protein coupled receptors
  • a and B adrenergic
  • Serotonin
  • Dopamin
  • Muscarinic ACh
Term
Facts about Depression
Definition
  • Leading disability worldwide
  • 9.5% adult Americans
  • Twice as many women as men
Term
What are affective disorders?
Definition
Syndromes, of clusters of symptoms where only one is a disorder of the mood
Term
What are 6 traits of depression?
Definition
  1. Abnormality of mood: up-mania, down-depression
  2. Vegetative Features: sleep, appetite, weight gain/loss, sex drive
  3. Cognitive Features: attention span, frustration tolerance, memory
  4. Impulse control: suicide, homicide
  5. Behavior Features: motivation, pleasure, interests, fatigability
  6. Physical: headaches, stomach aches, muscle tension
Term
What long is one episode of depression?
Definition
6 - 24 months
Term
What is depression response? What is remission? Recovery? Relapse?
Definition

When treatment improves at least 50% of symptoms. Not cured, but better.

 

Remission is when all symptoms all clear for several months.

 

Recovery is when symptoms stay gone for more than 6 months

 

Relapse is when symptoms return following remission.

Term
What are the three types of depression?
Definition
  • Monopolar/Major: 17% lifetime risk; intense sadness, disruption of circadian rhythms, suicidal behavior, good response to drugs
  • Dysthymic: low grade but chronic depression that lasts more than 2 years
  • Bipolar: depression, full mania, lesser mania, mixed episodes; can cycle 4 times in 12 months
Term
How well does medication work? Placebos?
Definition

67% respond after 8 weeks, but the other 33% don't response at all.

 

 

All antidepressants have the same response rate.


Placebos are THE OPPOSITE, 33% respond within 8 weeks, 67% do not respond at all.

Term
What are the biggest risk factors for recurrence?
Definition
  • Multiple prior episodes
  • Incomplete recoveries
  • Sever episodes
  • Chronicity
  • Bipolar/psychotic
Term
What are the rules of 7?
Definition
  • 1 of 7 with recurrent depression commits suicide
  • 70% of suicides of depression
  • 70% of suicides see their primary care physician within 6 weeks of suicide
  • Suicide is 7th leading cause of death in US
Term
What are some differences in causes in depression for women and men?
Definition
  • Women: menstrual cycle, pregnancy, postpartum depression, miscarriage, pre-menopause, menopause
  • Men: less like to admit it, 4 times the suicide rate, increased risk or coronary disease
Term
What were previous ways of treating depression? What's used now?
Definition
  • Shock therapy to increase NE and 5HT
  • Trephination
  • Frontal lobotomies
  • Deep brain stimulation (still used)
  • CBT and IPT (still used)
  • Drugs (still used)
Term
What are tricyclics?
Definition
  • Use began in 1950's for a ton of disorders
  • They are nonselective MA reuptake inhibitors (5HT and NE, but can affect more)
  • Extremely easy to overdose on, leading cause of death by drugs in US; can also cause cardiac complications
  • Side effects: dry mouth and eyes, unusual taste in mouth, blurry vision, weight gain, restlessness, anxiety constipation
  • Examples: imipramine, amitriptyline, desipramine, clomipramine, limbitrol
Term
What are MAOIs? What are the two main enzymes?
Definition
  • They inhibit the enzyme that break down monoamines (MAOs)
  • MAO A: breaks down 5HT, NE, tyramine; clorgiline blocks this
  • MAO B: DA; selegiline blocks this
Term
What are some examples of MAOIs? What is bad about these?
Definition
  • Tranylcypromine and phenelzine (block both A and B)
  • They have serious side effects and interactions --> low blood pressure, light headedness, insomnia, sleepiness, dry mouth, weight gain, reduced alcohol tolerance, headache, CNS stimulation, venous pooling, sexual disturbances
  • Cannot eat tyramine while on these --> it's an amino acid present in many foods and you cannot metabolise it when on MAOIs. It will displace NE and E from nerve endings and adrenal glands. This leads to headache, cardiac arrhythmias, cardiac failure, and cerebral hemorrhage.
Term
What foods should you avoid while on MAOIs?
Definition

Beer, ale, Chianti wine, vermouth, whiskey and liqueurs

 

Banana peels, bean curd, soy bean, cheese, ginseng, sausage, bologna, pepperoni, salami, shrimp paste, soups, yeast extracts

Term
What are two 2nd generation MA reuptake inhibitors?
Definition
  1. Trazodone: it's nonlethal overdose; effects are sedation, hypotension, preapism, dry mouth, blurred vision, nausea, headache, weight gain
  2. Buproprion: anxiety, insomnia, weight loss; start in low doses and taper up
Term
What are some SSRIs? What are their side effects?
Definition
  • Fluoxetine, sertraline, paroxetine, fluvoxamine, citalopram
  • They are better tolerated then TCAs and MAOIs, but can cause anxiety, insomnia, more appetite, tremors, GI symptoms, headache, rashes, sexual dysfunction
Term
Where are most 5HT receptors? What is serotonin symptoms?
Definition

Raphe Nucleus

 

When serotonergic drugs are taken together, can lead to fever, agitation, hypertension, hyperthermia, rigidity, myoclonus, seizure, coma, death.

Term
What is prozac used to treat? What is its MOA? Side effects?
Definition
  • Depression, bulimia, and OCD
  • SSRI, it also upregulates GABA-B receptors and may have very small effects on 5HT receptors
  • Anxiety, insomnia, weight loss, mania, siezures
Term
What is zoloft used to treat? What is its MOA? Side effects?
Definition
  • Depression, panic disorder, OCD, and PTSD
  • Inhibits 5HT reuptake in CNS, weak effects on adrenergic synapses, downregulates NE receptors
  • Dependence, extreme agitation, hostility, aggression, suicide; it's very controversial and there has been a lot of law suits
Term
What is paxil used to treat? What is its MOA? Side effects?
Definition
  • Depression
  • Most potent SSRI, also has slight affinity for muscarinic and NE receptors
  • Nausea, somnolence, sweating, tremor, dizziness, dry mouth, insomnia, male sexual dysfunction
Term
What is luvox used to treat? What is its MOA? Side effects?
Definition
  • Depression, panic disorder, OCD, eating disorder, chronic tension headaches
  • SSRI
  • Dry mouth, constipation, decreased appetite, nausea, insomnia, drowsiness, dizziness, headache, agitation, sleep disorders, diarrhea, weakness, hypomania, nervousness, sexual problems
Term
What is celexa used to treat? What is its MOA? Side effects?
Definition
  • Depression
  • Very specific SSRI
  • Mania/hypomania, serotonin syndrome symptoms
Term
What is remeron used to treat? What is its MOA? Side effects?
Definition
  • Depression, anxiety, motor retardation, cognitive and sleep disturbances
  • Targest specific 5HT receptors, enhances 5HT and NE transmission, excites 5HT1 and inhibits 5HT2/3, antagonist for histamine sometimes
  • Drowsiness, increased appetite, weight gain, dizziness; should not be used with other antidepressants or MAOIs, painkillers, or antihistamines.

It's specificity causes fewer serotonergic effects

Term
What is cymbalta used to treat? What is its MOA? Side effects?
Definition
  • Depression, GAD, and fibromyalgia
  • SNRI
  • More effective than fluoxetine
Term
What is valdoxan used to treat? What is its MOA? Side effects?
Definition
  • Depression, first melatonergic antidepressant
  • Relieves sleep complaints by agonist on MT1/2 (melatonin receptor); not approved in US
Term
What is edronax used to treat? What is its MOA? Side effects?
Definition
  • Depression, panic disorder, ADD/ADHD
  • NRI, stimulates alpha-2 and beta-NE receptors
  • No good reviews
Term
What is nefazodone used to treat? What is its MOA? Side effects?
Definition
  • Depression, panic disorder, ADD/ADHD
  • Blocks 5HT2a receptors and inhibits 5HT and NE reuptake
  • Discontinued in some countries because of liver damage
Term

What is venlafaxine used to treat? What is its MOA? Side effects?

 

"Prozac with a punch"

Definition
  • Depression: 6th most popular antidepressant
  • Inhibits reuptake of NTs nonselectively (like tricyclics) but has no effect on muscarinic, alpha adrenergic, or histaminergic receptors
Term
What is survector used to treat? What is its MOA? Side effects?
Definition
  • Low grade depression or dysthymia
  • SDRI
  • Not in US
Term
What is Riluzole used to treat? What is its MOA? Side effects?
Definition
  • Depression
  • Reduces glutamate release and increases reuptake
  • Liver damage
Term
What is Fetzima used to treat? What is its MOA? Side effects?
Definition
  • Symptoms of bipolar disorder (depression, mania, mixed state)
  • SSRI/SNRI
Term
What are characteristics of mania?
Definition
  • Inflated self-esteem
  • Severe insomnia
  • Excessive talkativeness
  • Racing thoughts
  • Distractibility
  • Activities done to excess
  • Pursuit of risky behaviors
Term
What is used to treat bipolar disorder?
Definition
  • Lithium
  • Valproate
  • Olanzapine
  • Geodon
  • Seroquel
  • Lamotrigin, gabapentin, topiramate
Term
Can you overdose of lithium? What are its side effects?
Definition

Yes, but usually by accident.

 

Nausea, vomiting, diarrhea, tremor, confusion, arrhythmias, convulsions

 

Tremor, sedation, ataxia, aphasia, thyroid enlargement, polyuria, salivary gland dysfunction, arrhythmias, edema, leucocytosis

Term
What is seroquel used to treat? What is its MOA? Side effects?
Definition
  • Bipolar disorder
  • Blocks D2 and 5HT2 receptors
Term
What is abilify used to treat? What is its MOA? Side effects?
Definition
  • Bipolar, schizophrenia, add-on for depression
  • High affiniy for D2/3, 5HT1/2a receptors
Term
What is latuda used to treat?
Definition
  • Bipolar
  • It's very specific
Term
What is ketamine for?
Definition

New and treats depression very quickly. Also works on bipolar and suicidal behavior

 

Blocks the NMDA receptor and enhances AMPA receptor

Supporting users have an ad free experience!