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Freeman Chapters 1,24-27
Freeman Chapters 1,24-27
167
Biology
Undergraduate 1
02/05/2011

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Term
energy
Definition
required to stay alive and reproduce
Term
organism
Definition
life-form made of one or more cells
Term
cells
Definition
membrane bound units
regulates passage of materials
highly organized
bounded by plasma membrane
contain concentrated chemicals in aq. soln.
reproduce by dividing
Term
theory
Definition
explanation for general class of phenomena
Term
smallest organism
Definition
bacteria
Term
cell theory
Definition
all cells are made of cells
all cells come from preexisting cells
Term
hypothesis
Definition
proposed explanation
Term
evolution
Definition
change in population characteristics over time
species are related by common ancestry
change in allele frequency
Term
natural selection
Definition
individuals vary
heritable traits are passed to
offspring
certain versions of heritable traits help survival

increases freq. of alleles that contribute to reproductive success
only agent responsible for evolution
Term
fitness
Definition
ability to produce offspring
Term
adaption
Definition
trait that increases fitness of an individual's environment
Term
speciation
Definition
natural selection caused divergence to form new species
all species come from pre-existing species
all species have a common ancestor
Term
phylogeny
Definition
genealogical relationships
family tree
Term
rRNA
Definition
can change during evolution
Term
lineages
Definition
bacteria
archea
eukarya
Term
taxonomy
Definition
effort to name + classify organisms
Term
taxonomy
Definition
effort to name + classify organisms
Term
phylum
Definition
major lineages in each domain
Term
scientific name
Definition
genus + species
Term
typological thinking
Definition
species are unchanging types
variations are misleading
Term
Aristotle
Definition
species are fixed
some species are higher
great chain of being
Term
Lamarkian evolution
Definition
always producing more complex and better species
Term
population
Definition
individuals of the same species living at the same time
Term
descent with modification
Definition
past species are ancestors of today's species

descendant species are modified

species change through time
Term
fossil
Definition
any trace of an organism that lived in the past
Term
fossil record
Definition
all fossils found and described in literature
Term
geologic time scale
Definition
sequence of named intervals called eons, eras and periods relative to major even in Earth's history
Term
Radiometric dating
Definition
observed decay rates
Term
Earth's age
Definition
4.6 bil years
Term
law of succession
Definition
extinct species preceded by similar
Term
transitional feature
Definition
intermediate trait between older and younger species
Term
genetic homology
Definition
occurs in DNA
Term
developmental homology
Definition
recognized in embryos ie. gill pouch
Term
structural homology
Definition
morphology
Term
internal consistency
Definition
data from independent sources agree
Term
Darwin's 4 postulates
Definition
variation
heritability
reproduction
natural selection
Term
natural selection
Definition
certain individuals with certain characteristics produce more offspring
Term
4 steps for evolution
Definition
variation
heritability
reproduction
natural selection
Term
natural selection acts on...
Definition
individuls
Term
populations...
Definition
evolve
Term
allele frequencies change in...
Definition
populations
Term
acclimation
Definition
changes in environmental conditions
DOES NOT cause evolution
not progressive
Term
True or false: evolution is progressive
Definition
false
Term
genetic correlation
Definition
single allele affects multiple traits
Term
fitness trade-off
Definition
trait compromise
Term
True or false. Selection acts on many traits simultaneously
Definition
True
Term
True or false: Every adaption is compromise
Definition
True
Term
allele
Definition
1 variation on a gene eg. G or g
Term
Plato
Definition
God created perfect beings
Term
Darwin
Definition
evolution through natural selection
(didn't know genes or bacteria)
Term
Evidence of change through time
Definition
fossils
extinct species
Term
Mechanisms that shift allele frequency
Definition
natural selection
genetic drift
gene flow
mutation
Term
genetic drift
Definition
causes allele freq. to change randomly
random with respect to fitness
most pronounced in small pop.
can lead to loss of function
due to sampling error
Term
gene flow
Definition
individuals leave 1 pop, join another, breed

random with respect to fitness
Term
Hardy-Weinberg assumption
Definition
no natural selection
no genetic drift
no gene flow
no mutation
random mating
Term
genetic variation
Definition
# and frequency of alleles present in a pop
Term
directional selection
Definition
avg. phenotype changed in one direction
reduces genetic variatio
Term
purifying selection
Definition
disadvantageous alleles
Term
stabilizing selection
Definition
reducing both extremes in a pop.
no change in avg. value of a trait
genetic variation is reduced
Term
disruptive selection
Definition
eliminates phenotypes near avg. value
can lead to new species
Term
heterozygote advantage
Definition
responsible for balancing selection
no single allele has a distinct
advantage

occurs when environment varies over time
Term
frequency-dependent selection
Definition
certain alleles are favored when they are rare
Term
genetic marker
Definition
specific allele that causes a distinctive phenotype
Term
founder effect
Definition
change in allele freq. that occurs when a new pop. is est.
Term
mutation
Definition
leads to loss of genetic diversity and new alleles

small role in human evolution

ultimate source of genetic variation

no evolution without it
increases genetic diversity
Term
gene flow____genetic diversity
Definition
increase
Term
genetic drift____genetic diversity
Definition
decrease
Term
selection____genetic diversity
Definition
decrease
Term
deleterious allles
Definition
lower fitness
eliminated by purifying selection
Term
beneficial allele
Definition
allows individual to produce more offspring
increase freq. due to natural selection
Term
inbreeding
Definition
changes genotype freq. not allele freq.
doesn't cause evolution
Term
inbreeding depression
Definition
decline in average fitness
Term
loss-of-function mutations
Definition
usually deleterious or lethal
Term
inbred mating_____fitness
Definition
lowers
Term
inbreeding____________evolution
Definition
speeds
Term
sexual selection
Definition
female choice
male-male competition
Term
carotenoids
Definition
protect tissues
stimulate immune system
come from diet
Term
females look for males with
Definition
physical characteristics
resources/parental care
both
Term
divergence
Definition
mutation
selection
genetic drift
Term
speciation results from
Definition
isolation and divergence
Term
isolation
Definition
lack of gene flow
Term
species
Definition
evolutionarily independant pop.
Term
species criteria
Definition
biological
morphological
phylogenic
Term
biological species concept
Definition
reproductive isolation
no interbreeding
Term
prezygotic isolation
Definition
prevents mating
Term
post zygotic isolation
Definition
non-viable offspring
Term
prezygotic types
Definition
temporal
habitat
behavioral
genetic barrier
mechanical
Term
temporal
Definition
breed at different times
Term
habitat
Definition
breed in diff habitats
Term
behavioral
Definition
different courtship displays
Term
genetic barrier
Definition
eggs and sperm incompatible
Term
mechanical
Definition
reproductive structures incompatible
Term
postzygotc types
Definition
hybrid viability
hybrid sterility
Term
hybrid viability
Definition
offspring don't develop normally and die as embryos
Term
hybrid sterility
Definition
offspring become sterile adults
Term
morphospecies
Definition
size and shape
likely with independence and isolation
Term
biological species concept disadvantages
Definition
no fossils or asexual
Term
morphospecies concept disadvantages
Definition
no cryptic species
subjective
Term
phylogenetic species concept
Definition
reconstructing evolutionary history
Term
monophyletic group/clade/lineage
Definition
ancestral pop
identified by synamorphies
Term
synamorphies
Definition
unique trait (homologous)
Term
subspecies
Definition
pop. lives in discrete geographic area
distinguishing features
Term
speciation begins when
Definition
gene flow lowers
Term
physical isolation
Definition
dispersal or vicariance
Term
allopatric
Definition
speciation begins with physical isolation
Term
vacariance
Definition
physical splitting of habitat
Term
genetic isolation
Definition
first requirement of speciation
Term
speciation
Definition
genetic isolation
genetic divergence
selection
genetic drift
Term
genetic variation
Definition
protects from disease
Term
genetic bottleneck
Definition
result of catastrophic event
Term
sympatry
Definition
close enough to interbreed
Term
sympatric speciation
Definition
occurs even when gene flow is possible
rare/non-existant
Term
polyploidy
Definition
occurs when error in mitosis or meiosis results in chromosome doubling
Term
polyploidization
Definition
massive mutation that affects entire chromosome
Term
autopolyploid
Definition
results in doubling of chromosome number
all from same species
Term
allopolyploid
Definition
parents from different species
Term
hybrid zones
Definition
geographic area where interbreeding occurs
Term
outcomes of secondary contact of 2 pop.
Definition
fusion of pop.
reinforcement of divergence
founding of stable hybrid zones
extinction of pop.
creation of new species
Term
selection ____________ as variation ______
Definition
decreases, increases
Term
phylogenetic species concept disadvantages
Definition
expensive

hardly any complete geonome sequences
Term
synamorphy
Definition
shared characteristic of a particular group
Term
monophyletic
Definition
all descendants who share a single ancestor
Term
polytomy
Definition
more than one branch coming off
Term
taxon
Definition
any tip
Term
phenetic approach
Definition
computing a stat that summarizes similarity
Term
genetic distance
Definition
avg. % of bases in DNA that differ between 2 pop.
Term
Cladistic approach
Definition
synamorphies
Term
derived trait
Definition
modified form of ancestral trait
Term
homology
Definition
same source
Term
homoplasy
Definition
same form
Term
convergent evolution
Definition
natural selection favors similar solutions to problems by asimilar way of making a living
Term
parsimmony
Definition
most likely solution
implies least amt change
Term
outgroup
Definition
closely
Term
parsimmony
Definition
most likely solution
implies least amt change
Term
outgroup
Definition
closely related but not a part
Term
SINES
Definition
short inspired nuclear elements
transposable elements
Term
fossils begin in
Definition
ash
sand
mud
other sediment
Term
fossil exposure
Definition
erosion
road cut
quarrying
Term
limitations of fossil record
Definition
habitat bias
taxonomic and tissue bias
temporal bias
abundance bias
highly non-random database
Term
habitat bias
Definition
places with deposited sediments
beaches, swamps, mudflats
pre-buried
Term
taxonometric and tissue bias
Definition
organisms with hard parts
clams, snails, pollen grains, shark teeth
Term
temporal bias
Definition
recent more common
tectonic plates obliterate fossils
Term
Precambrian
Definition
542 mya
Hadean, Archaean, Proterzoic eons
unicellular life
no O2
Term
Phanerozoic
Definition
542 mya - present
Paleozoic
Mesozoic
Cenozoic eras
Term
Palesozoic era
Definition
mmajor animal lineages
land plants
fungi
Term
mesozoic era
Definition
end-Permian extinction events - dinosaur extinction
gymnosperms
Term
cenozoic era
Definition
paleogene period
neogene perios
angiosperms
mammals
Term
polyploidy____gene flow
Definition
decrease
Term
paraphyletic
Definition
ancestor included 1, not all of offspring
Term
most compelling events in life's history
Definition
species originate
species go extinct
Term
adaptive radiation
Definition
1 lineage many descendants
wide diversity of habitats
array of resources
monophyletic group, speciated rapidly, diversified ecology
Term
niche
Definition
describe range of resources a species can use and range of tolerable conditions
Term
adaptive radiation triggers
Definition
resources
exploit resources
Term
ecological opportunity
Definition
availability of new or novel types of resources
Term
Cambrian Explosion
Definition
1st animals 565 mil yrs. ago
sponges, jellyfish, simple worms
shells, exoskeletons, internal skeltons, legs, eyes, mandibles, muscles, brains
small then big organisms
Term
fauna
Definition
collection of animal species
Term
fauna
Definition
collection of animal species
Term
Doushantuo microfossils
Definition
tiny sponges
clusters of cells
filtered debris from H2O
1st animals
Term
Ediacaran faunas
Definition
sponges, jelly-fish,burrows, tracks
no cels, limbs, mouths, feeding apppendages
filteres as burrowed
immobil on seaa floor
floated in H2O
Term
Burgess shale faunas
Definition
sponges jelyfish arthropods mollusks echinoderms worms vertebrates

bigger

morphological complexity

diversification of how to make a living
swam, walked, ran, slithered, clung
preators, scavengers, filter feeders, grazers
Term
Cambrian explosion triggers
Definition
higher O2 lvls-efficient aerobis respiration, large bodies

evo of predation - drilling
new niches
now genes, bodies
Term
Hox genes
Definition
signal where cells are in embryo early animals had few or none mutations increase Hox genes large and more complex are predators
Term
mass extinction
Definition
rapid extinction of large # of lineages
when 60% extant dies
The Big 5
sudden, temporary
Not due to poor adaption
Term
background extinction
Definition
lower avg rate of extinction

normal environmental change, disease competition, from natural selection
Term
End-Permian Extinction
Definition
flood basalts called siberian traps
added heat, CO2 for global warming, sulfuric acid
sea lvl drop
terrestrial animals
Term
impact hypothesis
Definition
asteroid 60-80% multicellular species

fireball, tsunami, acid rain, sun blocked
Term
K-P asteroid support
Definition
iridium
shocked quartz
crater NW of Yucatan
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