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- HUGO Nomenclature Comittie
- provides unique human gene names and symbols
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- federated database system that provides unified access to disparate, geographically distributed data souces
- data agnostic and platform independent
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| formal representation of a set of concepts within a domain and the relationships between those concepts |
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- built for purpose of annotation of genes and protein databases applicable to all species
- 3 structured,controled vocabularies that describe gene products in a species-independent matter
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| commonly recoginized series of events,like cel division |
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| where in the cell does the protein act |
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| directed acyclic graph(DAG) |
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Definition
- 1:n parent
- 0:n childern
- relations are is-a or part-of
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Definition
- UniProtKBtocollection of functional info on proteins with annotions
- two sections
- curated(swiss-prot) and aumatic(TrEMBL)
- 95% of proteins are translated from ORFs
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Term
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Definition
- findings in one is often relevant to many
- easy large scale systematic experimentation
- most experiments are cellular models or organoid models
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| Reason of model organism databases |
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Definition
- conventions on naming
- platform to retrieve information from publications and share data about an organism
- datasets from publications
- annotations of the genome
- tools
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Definition
| establishes a large dataset of gene to phenotype relations based on genetic research |
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