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unit 1 life 102 (CSU, instructor: Bjostad)
stuff for first exam, mainly chapters 4 and up
119
Biology
Undergraduate 1
08/31/2012

Additional Biology Flashcards

 


 

Cards

Term
Primary structure of protein
Definition
Amino acids linked together 
Term
secondary protein structure
Definition
coils and folds in a polypeptide chain (from hydrogen bonds)
Term
Tertiary protein structure
Definition
determined by interactions among side chains (R groups)
Term
Quaternary protein structure
Definition
Protein consists of multiple polypeptide chains.
Term
Nucleic acids
Definition
store & transmit hereditary info
Term
nucleic acid structure 
Definition

Nitrogenous base - sugar - phosphate group

 

Term
Steroids
Definition
lipids with carbon skeleton. consists of 4 fused rings.;
Term
Cholesterol
Definition
important steroid in animal cell membrane
Term
proteins
Definition
consists of 1 or more polypeptides. make more than 50% of dry mass in most cells
Term
enzymatic proteins
Definition
selective acceleration of cell's chemical reactions
Term
storage proteins
Definition
storage of amino acids
Term
Hormonal proteins
Definition
coordination of organism's activities 
Term
contractive and motor proteins 
Definition
Movement. (actin and myosin
Term
Defensive proteins
Definition
protection against disease
Term
transport proteins
Definition
transport of substances (often embedded in cell membrane)
Term
receptor proteins
Definition
response of cell to chemical stimulus
Term
structural proteins
Definition
support
Term
polypeptides
Definition
polymers built from the same set of 20 amino acids
Term
amino acids
Definition
differ in properties due to side chains, called R groups
Term
Glycerol
Definition
backbone of phospholipid 
Term
energy storage
Definition
Main function of fat
Term
saturated fats
Definition
fatty acids have max number of hydrogen atoms possible, no double bonds
Term
unsaturated fats
Definition
fatty acids have one or more double bonds, allowing them to flex and bend
Term
Fat molecule (triacylglycerol)
Definition
fats separate from water because water molecules form hydrogen bonds with each other
Term
fats
Definition
constructed from 2 types of smaller molecules: glycerol and fatty acids
Term
fatty acid
Definition
has carboxyl group and long carbon skeleton
Term
lipids
Definition

Class of large biological molecules that are not usually regarded as polymers

 

hydrophobic. most important ones are fats, phospholipids , and steroids.

 

Term
Chitin
Definition

structural polysaccharides

exoskeleton of arthropods and in cell walls of fungi

Term
cellulose
Definition
Polysaccharide that is major component of plant cell wall.
Term
Glycogen
Definition
storing of polysaccharide in animals
Term
starch
Definition
storage of polysaccharides in plants
Term
disaccharide
Definition

dehydration reaction joins 2 monosaccharides

called a glycosidic linkage

Term
Monosaccharides
Definition

Simple carbohydeates, single sugars.

Made from many connected monosaccharides

usually have molecular formulas that are multiples of CH2

Term
Carbohydrates
Definition
Sugars and polymers of sugar
Term
Hydrolysis
Definition

reverse of dehydration process. 

adds water to break apart polymers

Term
Condensation/dehydration reaction (process)
Definition

used often to make macromolecules.

bonding of 2 monomers by loss of water molecules

Term
monomer
Definition
small building blocks
Term
polymer
Definition
Long molecule consisting of many similar building blocks. (monomers)
Term
  • Macromolecules
Definition

Large biological molecules 

  • carbohydrates
  • lipids
  • proteins
  • nucleic acid
Term
biological molecule order
Definition
atoms - small organic molecules - macromolecules
Term
hydrocarbon
Definition
organic molecule consisting of only carbon and oxygen
Term
Isomers
Definition
coumpounds with the same molecular formula, but different structure and properties
Term
Structural isomers
Definition
Different covalent arrangement of atoms
Term
Geometric isomers
Definition
same COVALENT arrangement, but different STRUCTURAL arrangement 
Term
Enantiomers
Definition
Isomers that are mirror images of each other
Term
ATP
Definition

Adenosine triphosphate 

 

Primary energy transferring molecule

Term
Cells (description)
Definition

surrounded by membrane (phospholipid bilayer) that is interwoven with cholesterol and protein.

 

Filled with organelles that each have their own membrane

Term
Cell fractionation
Definition
cell is taken apart and spun in centrifuge to separate major organelles from one another
Term
Cytosol/Cytoplasm
Definition
semifluid substance inside of a cell
Term
features of a cell
Definition
cytosol, plasma membrane, chromasomes, ribasomes
Term
nucleoid
Definition
region where DNA is in a PROKARYOTIC cell
Term
plasma membrane
Definition

Selective barrier around cell that allows certain things in and out  

 

(phospholipid bilayer) 

Term
ribosomes
Definition
use DNA to make proteins
Term
nuclear envelope
Definition
encloses the nucleus. Separates it from the cytoplasm
Term
Double Membrane
Definition

formed around nucleus

each membrane has lipid bilayer 

Term
nuclear lamina
Definition
maintains shape of nucleus
Term
chromatin
Definition

condenses to form chromasomes

 

formed by DNA and proteins

Term
Nucleolus
Definition
Site of ribasomal RNA synthesis in nucleus
Term
Ribosomes
Definition

Particles made of Ribosomal RNA and protein

 

Carry out protein synthesis in cytosol and on outside of ER or nuclear envelope 

Term
Endomembrane System consists of:
Definition

Nuclear envelope

 

Endoplasmic Reticulum

 

Golgi Apparatus

 

Lysosomes

 

Vacuoles

 

Plasma Membrane

Term
Endoplasmic reticulum
Definition

2 regions

 

accounts for more than half of total membrane in cell

Term
smooth endoplasmic reticulum
Definition

no ribasomes attached 

 

synthesizes lipids, metabolizes carbohydrates, detoxifies poison, stores calcium 

Term
rough endoplasmic reticulum
Definition

ribasomes stuck to it

 

bound ribasomes secrete glycoproteins, distribute transport vesicles, membrane factory for cell

Term
Golgi aparatus
Definition
flattened membraneous sacs called cisternae 
Term
Golgi apparatus functions
Definition

modifies production of ER

 

Manufactures macromolecules

 

Sorts and packages materials into transport vesicles

 

 

Term
Cis face of golgi apparatus
Definition
receiving face
Term
trans face of golgi apparatus
Definition
shipping side 
Term
Mitochondria and Chloroplasts
Definition

not part of endomembrane system

 

have double membrane

 

have proteins made by free ribasomes 

 

contain their own DNA

Term
Mitochondria
Definition
smooth outer membrane, with inner membrane called cristae
Term
inner membrane of mitochondria
Definition

makes 2 compartments: intermembrane space and mitochondrial matrix

 

 

Term
christae 
Definition
makes large surface area for enzymes that produce ATP
Term
Thylakoids
Definition
membranous sacs in chloroplasts 
Term
granum
Definition
stacks of thylakoids in chloroplasts
Term
stroma
Definition
fluid inside chloroplast
Term
lysosome 
Definition

membranous sac of hydrolytic enzymes that can digest macromolecules. uses hydrolysis

 

fuses with food vacuole and digests molecules

Term
Phagocytosis 
Definition

cell that engulfs another cell

 

forms a food vacuole

Term
peroxisomes 
Definition

metabolic compartments w/ single membrane 

produce hydrogen peroxide to break apart molecules 

Term
vacuoles 
Definition
diverse maintenance compartments
Term
food vacuoles
Definition
formed by phagocytosis 
Term
contractile vacuoles
Definition
found in freshwater protists
Term
central vacuoles
Definition
in mature plant cells. hold organic compounds and H2O
Term
3 main fibres in the cytoskeleton
Definition

Microtubules

 

Microfilaments

 

Intermediate filaments 

Term
Microtubules
Definition

thickest fibres in cytoskeleton. tubulin self aggregates into tubes

 

control beating of cilia and flagella

Term
Microfilaments 
Definition
thinnest fibre. 2 strands of actin self assemble into rope shape. Forms into a 3d network called a matrix
Term
Intermediate filaments
Definition
Keratin protein self assembles into coiled cable shape
Term
Centrosome
Definition
Near nucleus. Microtubules grow outward from it. Organize microtubules. 
Term
Centrioles
Definition
Organisation of microtubules. each centrosome has two. 
Term
Common structure of cilia and flagella
Definition

Core of microtubules

 

Basal Body (anchor point)

 

Dynein (drives bending movement)

Term
How Dynein moves flagella/cilia
Definition

Arms alternately grab, move, and release outer microtubules

 

Protein crosslinks limit siding

 

Forces exerted by dynein cause doublets to curve, bending cilia and flagella

Term
Extracellular structures
Definition

Cell walls of plants

 

extracellular matrix of animal cells (filler between cells)

 

intercellular junctions

Term
cell wall
Definition

extracellular structure that distinguishes plant from animal cells

 

made of cellulose fibres embedded in other polysaccharides and proteins

Term
plant cell wall layers
Definition

primary: thin and flexible

 

middle lamella: thin layer between primary walls of adjacent cells

 

secondary wall: added between plasma membrane and primary cell wall

 

Plasmodesmata: channels between adjacent cell walls

Term
extracellular matrix (ECM)
Definition

provide support, adhesion, etc. to animal cells. 

 

made up of glycoproteins

Term
cell junctions
Definition

Tight junctions: membranes of neighboring cells pressed tightly together. no leakage 

 

Desmosomes: anchoring junctions. direct interactions

 

gap juctions: communication. gaps provide cytoplasmic channels between cells

Term
plasmodesmata
Definition

channels that perforate cell walls

 

water and small solutes can pass

Term
phospholipid movement within membrane
Definition

lateral drifting

 

very rarely flips upside down

Term
important job of cholesterol 
Definition

influences membrane fluidity

 

warm temp: restrains movement 

Cool temp: maintains fluidity

 

Term
peripheral proteins
Definition
bound to membrane surface
Term
integral proteins 
Definition
penetrate hydrophobic core
Term
transmembrane proteins
Definition
spans through membrane
Term
Functions of membrane proteins 
Definition

transport

 

enzymatic activity

 

signal transduction

 

cell-cell recognition

 

intercellular joining

 

attachment to cytoskeleton and ECM

Term
function of transport proteins
Definition
let hydrophillic substances across membrane 
Term
channel proteins
Definition
hydrophillic channels
Term
aquaporins
Definition
facilitate passage of H2O
Term
carrier protein
Definition
bind to molecule and help across membrane
Term
diffusion 
Definition
tendency for molecules to spread out evenly in available space
Term
concentration gradient
Definition

difference in concentration of substance from one area to another 

 

passive transport

Term
osmosis
Definition
water diffuses across selective permeable membrane
Term
tonicity 
Definition
ability of solution to cause cell to gain/lose water
Term
hypertonic
Definition
solute concentration is greater than that inside the cell, cell loses water
Term
hypotonic
Definition
solute concentration is less than that inside the cell. cell gains water 
Term
facilitated diffusion
Definition
transport protein speeds up passive transport across plasma membrane.
Term
active transport 
Definition

moves substance against concentration gradient

 

requires energy

 

allows cell to maintain concentration gradient that differ from surroundings 

Term
electrochemical gradient 
Definition
chemical force and electrical force drive the diffusion of ions across membrane 
Term
electrogenic pump
Definition
transport protein that generates voltage across membrane 
Term
proton pump
Definition
electrogenic pump in plants, fungi, bacteria
Term
cotransport
Definition
active transport of solute indirectly drives transport of another solute
Term
exocytosis
Definition
transport vesicles migrate to membrane, fuse with it, and release contents 
Term
endocytosis
Definition

takes in macromolecules by forming vesicles from plasma membrane

 

reverse of exocytosis 

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